Asian Journal of Microbiology, Biotechnology & Environmental Sciences Paper

Vol 22, Issue 1, 2020; Page No.(140-148)

EVOLUTION-GUIDED OPTIMIZATION FOR SELECTING SITEDIRECTED MUTAGENESIS SITES OF AGROBACTERIUM TUMEFACIENS URONATE DEHYDROGENASE

MURUGAN R., PRATHIVIRAJ R., DIPTI MOTHAY AND CHELLAPANDI P.

Abstract

Uronate dehydrogenase (EC:1.1.1.203) belongs to the NAD-dependent epimerase/dehydratase (NDE/D) subfamily, which converts D-galacturonic acid and D-glucuronic acid into D-galactaric acid and D-glucaric acid, respectively. Uronate dehydrogenase-catalyzed reaction is reversible and no substratespecific activity in nature. Therefore, evolution-guided optimization approach was employed for screening, selection, and evaluation of its mutants to increase the substrate specificity with NAD+ and D-glucuronic acid. The phylogenetic analysis described that uronate dehydrogenase from A. tumefaciens evolved from the UDP-glucose-4-epimerase subfamily members and not related to closely related soil bacteria. Molecular conservation of its sequence-structure-function integrity was retained in this organism by imposing purifying selection and amino acid substitution patterns. A single amino acid substitution in its proton relay system or substrate-binding site found to bring several changes in the local structural environments. It hasenforced to optimize the substrate-binding site that recognizes the D-galacturonic acid or D-glucuronic acid. Hence, site-directed mutagenesis targets detectedinthis study would be useful for engineering uronate dehydrogenase subjected to be used in the biotransformation process of D-glucaric acid production.

Journal Issues
Vol 22, Issue 1, 2020
Vol 21, Issue 4, 2019
Vol 21, Nov. Suppl. Issue, 2019
Vol 21, Issue 3, 2019
Vol 21, Issue 2, 2019
Vol 21, Issue 1, 2019
Vol 20, Dec. Suppl. No.2, 2018
Vol 20, Issue 4, 2018
Vol 20, Dec. Suppl. Issue, 2018
Vol 20, Oct Suppl. Issue, 2018
Vol 20, Issue 3, 2018
Vol 20, Issue 2, 2018
Vol 20, Issue 1, 2018
Vol 20, Feb. Suppl. Issue, 2018
Vol 19, Issue 4, 2017
Vol 19, Nov. Suppl, Issue 2017
Vol 19, Issue 3, 2017
Vol 19, Issue 2, 2017
Vol 19, Issue 1, 2017
Vol 18, Issue 4, 2016
Vol 18, Issue 3, 2016
Vol 18, Issue 2, 2016
Vol 18, Issue 1, 2016
Vol 17, Issue 4, 2015
Vol 17, Issue 3, 2015
Vol. 17 Special Issue 2015
Vol 17, Issue 2, 2015
Vol 17, Issue 1, 2015
Vol 16, Issue 4, 2014
Vol 16, Issue 3, 2014
Vol 16, Issue 2, 2014
Vol 16, Issue 1, 2014
Vol 15, Issue 4, 2013
Vol 15, Issue 3, 2013
Vol 15, Issue 2, 2013
Vol 15 Issue 1, 2013
Vol 14, Issue 4, 2012
Vol 14, Issue 3, 2012
Vol 14, Issue 2, 2012
Vol.14, Issue 1, 2012
Vol.13, Issue 4, 2011
Vol.13, Issue 3, 2011
Vol.13, Issue 2, 2011
Vol.13, Issue 1, 2011
Vol.12, Issue 4, 2010
Vol.12, Issue 3, 2010
Vol.12, Issue 2, 2010
Vol.12, Issue 1, 2010
Vol 11, Issue 4, 2009
Vol 11, Issue 3, 2009
Vol 11, Issue 2, 2009
Vol 11, Issue 1, 2009
Vol 10, Issue 4, 2008
Vol 10, Issue 3, 2008
Vol 10, Issue 3, 2008
Vol 10, Issue 2, 2008
Vol 10, Issue 1, 2008
Vol 9, Issue 4, 2007
Vol 9, Issue 3, 2007
Vol 9, Issue 2, 2007
Vol 9, Issue 1, 2007
Vol 8, Issue 4, 2006
Vol 8, Issue 3, 2006
Vol 08, Issue 2, 2006
Vol 08, Issue 1, 2006
Vol 7 Issue 4, 2005
Vol 07, Issue 3, 2005
Vol 07, Issue 2, 2005
Vol 6 Issue 4, 2004
Vol 6 Issue 3, 2004
Vol 6 Issue 2, 2004
Vol 6 Issue 1, 2004
Vol 5 Issue 3, 2003
Vol 5 Issue 2, 2003
Vol 04, Issue 4, 2002
Vol 04, Issue 1, 2002
Vol 3 Issue 1-2, 2001
Vol 1 Issue 1-2, 2000
Vol 1 Issue 3-4, 1999
Vol 1 Issue 1-2, 1999
Looking for Past Issues? Click here to get them!!